Package: neatmaps 2.1.1

neatmaps: Heatmaps for Multiple Network Data

Simplify the exploratory data analysis process for multiple network data sets with the help of hierarchical clustering, consensus clustering and heatmaps. Multiple network data consists of multiple disjoint networks that have common variables (e.g. ego networks). This package contains the necessary tools for exploring such data, from the data pre-processing stage to the creation of dynamic visualizations.

Authors:Philippe Boileau [aut, cre]

neatmaps_2.1.1.tar.gz
neatmaps_2.1.1.zip(r-4.5)neatmaps_2.1.1.zip(r-4.4)neatmaps_2.1.1.zip(r-4.3)
neatmaps_2.1.1.tgz(r-4.5-any)neatmaps_2.1.1.tgz(r-4.4-any)neatmaps_2.1.1.tgz(r-4.3-any)
neatmaps_2.1.1.tar.gz(r-4.5-noble)neatmaps_2.1.1.tar.gz(r-4.4-noble)
neatmaps_2.1.1.tgz(r-4.4-emscripten)neatmaps_2.1.1.tgz(r-4.3-emscripten)
neatmaps.pdf |neatmaps.html✨
neatmaps/json (API)

# Install 'neatmaps' in R:

install.packages('neatmaps', repos = c('https://philboileau.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/philboileau/neatmaps/issues

Datasets:

edge_df - Edge List Data Frame
network_attr_df - Network Attributes Data
node_attr_df - Node Attribute Data

On CRAN:

2.70 score 1 stars 7 scripts 268 downloads 6 exports 99 dependencies

Last updated 3 years agofrom:7ad690dd21. Checks:9 OK. Indexed: yes.

Target	Result	Latest binary
Doc / Vignettes	OK	Mar 15 2025
R-4.5-win	OK	Mar 15 2025
R-4.5-mac	OK	Mar 15 2025
R-4.5-linux	OK	Mar 15 2025
R-4.4-win	OK	Mar 15 2025
R-4.4-mac	OK	Mar 15 2025
R-4.4-linux	OK	Mar 15 2025
R-4.3-win	OK	Mar 15 2025
R-4.3-mac	OK	Mar 15 2025

Exports:consClustResTable consensusChangeECDF consensusECDF consensusMap neatmap netsDataFrame

Dependencies:ALL askpass assertthat base64enc Biobase BiocGenerics bslib ca cachem callr cli cluster codetools colorspace ConsensusClusterPlus cpp11 crosstalk curl data.table dendextend digest dplyr egg evaluate fansi farver fastmap fontawesome foreach fs gclus generics ggplot2 glue gridExtra gtable heatmaply highr htmltools htmlwidgets httr igraph isoband iterators jquerylib jsonlite knitr labeling later lattice lazyeval lifecycle magrittr MASS Matrix memoise mgcv mime munsell nlme openssl permute pillar pkgconfig plotly plyr processx promises ps purrr qap R6 rappdirs RColorBrewer Rcpp registry reshape2 rlang rmarkdown sass scales seriation stringi stringr sys tibble tidyr tidyselect tinytex TSP utf8 vctrs vegan viridis viridisLite webshot withr xfun yaml

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
Node Attribute Aggregater	aggNodeAttr
Consensus Cluster Plus without Plots	calcICLNoPlots
Consensus Cluster Results in a Table	consClustResTable
Change in Area Under the ECDF	consensusChangeECDF
Consensus Cluster Plus without Plots	consensusClusterNoPlots
Consensus Matrix ECDFs	consensusECDF
Create Heatmaps of Consensus Matrices	consensusMap
Create Networks Using Edge Data Frame	createNetworks
Edge List Data Frame	edge_df
Structural Attributes of Networks Data Frame	getStructureAttr
Hierarchy	hierarchy
Explore Multi-Network Data	neatmap
'neatmaps' package	neatmaps-package neatmaps
Networks Data Frame	netsDataFrame
Network Attributes Data	network_attr_df
Node Attribute Data	node_attr_df
Scale Between 0 and 1	scaleColumns